Author: Ivan Costa
Hodge Laplacians and Trajectory Inference with PHLOWER accepted in Nature Methods
Thrilled to share PHLOWER, which uses Hodge Laplacians to build trajectory-level embedding for inferring complex cellular …
Hodge Laplacians and Trajectory Inference with PHLOWER accepted in Nature Methods Read more →
Commentary on the value of multimodal single cell sequencing for inference of gene regulatory networks out in Nature Methods
A short take on how computational approaches leverage multimodal single cell (RNA+ATAC) for inference of regulatory …
Paper on computational method for the detection of small DNA methylation signatures out in Genome Biology
In a study lead by Tiago Maié, we present a computational pipeline for the detection of …
Paper on spatial map of the myocardial infarction published in Nature!
We are delighted to have our manuscript co-lead by Zhijian Li being published in Nature! Great …
Paper on spatial map of the myocardial infarction published in Nature! Read more →
Congratulations Zhijian Li and Ronghui Li for theirs successful Ph.D. defenses
We are happy to have two fresh PhDs from the lab! We wish you all the …
Congratulations Zhijian Li and Ronghui Li for theirs successful Ph.D. defenses Read more →
Integration of Multimodal single cell data with MOJITOO – Accepted at ISMB/Bioinformatics
Our manuscript describing a fast and universal integration approach for multiome protocols was accepted as a …
Area Under the Curve for Clustering @ ECML/PKDD 2022
The paper “The area under the ROC curve as a measure of clustering quality” was published …
Area Under the Curve for Clustering @ ECML/PKDD 2022 Read more →
Kidney Fibrosis after COVID Infection / Study published in Cell Stem Cell
In a recently published work, we were able to show that there is increased scarring of …
Kidney Fibrosis after COVID Infection / Study published in Cell Stem Cell Read more →