Ph.D. position (m/f/d) in Epigenomics Bioinformatics
We invite applicants for a PhD position in computational methods to dissect DNA methylation changes and …
Ph.D. position (m/f/d) in Epigenomics Bioinformatics Read more →
Author: Ivan Costa
Footprinting in ATAC-seq published in Genome Biology
Our paper on HINT-ATAC is finally out in Genome Biology!
Decoding the function of lncRNAs – New computational metohd & sequencing protocols for detection of RNA-DNA Triple Helices
A paper describing TDF- a framework for detection of triple helix forming RNAs – is finally …
Open positions
We perform research on computational methods for analysis of epigenomics and transcriptomics data. Over the past …
Decoding the function of lncRNAs – Paper in Cell Stem Cell
Together with Kurian lab, we have delineated bionformatics framework to uncover novel antisense lncRNAs during cardiomyocite …
Decoding the function of lncRNAs – Paper in Cell Stem Cell Read more →
Papers in PNAS, Leukemia and Molecular Cell
A few successful collaborative efforts were recently published in top biomedical journals. With Zirkel and colleagues …
Project funded by DFG – Bioinformatics of Open Chromatin
The DFG has approved a “sachbeihilfe” project for the research on computational methods for analysis of …
Project funded by DFG – Bioinformatics of Open Chromatin Read more →
Paper published on Nature Methods – Footprint Analysis of DNase-Seq data
Our paper revisiting footprinting analysis from DNase-Seq with HINT-BC has been accepted in Nature Methods. Check the …
Paper published on Nature Methods – Footprint Analysis of DNase-Seq data Read more →
Tutorial on Inference of Regulatory Networks at ISMB/ECCB 2017
In a joint effort with Marcel Schulz (MPI Saarbrucken) and Matthias Heinig (Helmholtz Center Munich) , …
Tutorial on Inference of Regulatory Networks at ISMB/ECCB 2017 Read more →
Collaborative work published in Nature Communications, Genome Research and Gut
The Costa lab has participated in several collaborative works, which has been published in important journals …
Collaborative work published in Nature Communications, Genome Research and Gut Read more →